Resources needed

Resources Needed

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Our Resources Needed page aggregates all posts for volunteer and resources needed for open research projects. These resources may include lab time, materials, CPU cycles computations - whatever is needed to move an open research project forward. If you are interested in a particular project, login and post a comment expressing your interest.

Need Help With Your Project?

To post a request for resources for your own open research project, you may login and create a blog page with a "Subject" of Resources needed and it will automatically be added to this page. If these resources are related to a specific project logged within TSL you can also create/associate the resource request page as a "child page" to your project page. This will allow people to find your resolource request needs from both your project page and the resources needed menu item.

General tips for posting a resources needed page:

  • People generally scan the web, use bullets
  • Provide explicit links to pages where you have more project details should you entice them with your bullets. You can create a project page or a blog page to describe your project.
  • Describe what's in it for the volunteers. What will they learn, how will they help the world, what great contacts will they make?
  • Consider putting your email information directly on the post. I know that they can always post comments to find out more. But I've seen a big hesitancy in doing that. People are far more open with email.

Reacting to the first set of biological results

We have received encouraging biological results for the analogues we sent for testing before Christmas. Mat has discussed this here on TSL and on G+. Our best hit came from the "near-neighbour" compound and the original GSK hits came out slightly less active than in their original high throughput screen. However, Paul Willis at MMV rates TCMDC-123794 as a better lead than PMY 14-1 (TSL post).

A range of compounds are ready for testing with more coming.

I'm now happy with the data for TCMDC-123812 and TCMDC-123794. A bit of usual practical annoynce with TCMDC-123794 caused some trivial issues, namely a bit of repurification and acetone in the final spectra. These have now been taken care of and the compounds are ready for testing!
I've summarised the various intermediates and other compounds that are in the works on OpenWetWare. Please get in touch if you're interested in testing them.

TCMDC-123812 and 123794, pending purification.

I'm now fairly confident that I've made TCMDC-123794 and TCMDC-123812. By fairly confident I mean that I've got a reasonable looking but crude 1H NMR and low res. mass spec of both of the compounds. They are not clean by NMR after a column and the yield of the reaction was pretty bad (~20%). Still this isn't too bad for a first go, using a quick and dirty acid chloride. Most of the mass seems to go toward turning the acid into the anhydride. This is supported by NMR but mass spec hasn't given a positive result so far.

Student Optimization of PZQ Resolution

This page is intended as a place where people can discuss the student-led optimization of PZQ resolution. Relevant ELN is here, containing background here. Description of how students can help out is here (PDF). Paper will be assembled here. Blog post describing the project is here.

PZQ Manufacturing Capacity

Let's think long-term: How best to scale up production of PZQ?

This is likely most economically done in India or China (possibly Brazil or South Africa), all of which have well-established pharmaceutical manufacturing sectors.  However, building manufacturing capacity in poorer disease-endemic countries stands to have enormous benefits for economic development and potential to eventually better meet local and regional general pharmaceutical demand! 

Resolution of Praziquanamine

PZQ can’t be resolved as-is (unless anyone has any bright ideas how to resolve amides). One of the most promising strategies to prepare enantiopure praziquantel (using a strategy that starts from the racemate) is a classical resolution of praziquanamine (1, "PZQamine"). This molecule can either be made from scratch (it’s an intermediate in the current PZQ synthesis) or can be obtained in high yield from PZQ itself.
 
 

Pictet-Spengler route to rac-PZQ

 
The synthesis of rac-PZQ via the Pictet-Spengler route was developed by the Korean Shin Poong Pharmaceutical Company and obtains very low production costs of US¢7 per 600 mg tablet of the drug.


First step (amide bond formation to give 3)
Second step (attachment of acetal to give 4) - there's also a one-pot procedure to combine the first 2 steps
Third step (cyclization to praziquanamine to give 5)
Fourth step...

A Summary of What is Needed Right Now

Project A: Development of a low-cost enantioselective synthesis of PZQ. It's an open project, like everything on TSL.
Meaning?: contributors can change anything they wish on these pages.
If you wish to contribute: please don't leave comments here. Instead, edit the pages below directly or leave comments.
Other ways to interact: The Friendfeed page and the Lab Book Blog (for the Pictet-Spengler approach)

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